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My Analysis - Budget 2026 - Indirect Taxes

Rupesh Sharma
Budget 2026 indirect tax proposals: GST valuation, refunds, advanceruling fixes and extensive customs reforms to ease trade and compliance Budget 2026 proposes comprehensive indirect tax changes: GST valuation now permits postsupply discounts without prior invoice linkage, subject to recipient ITC reversal by credit note, and Section 34 expressly covers such credit notes - providing statutory clarity and reducing valuation disputes. Refund rules expand provisional refunds to inverted duty cases and remove export refund thresholds, improving cash flow. Interim appellate power for advance rulings is introduced by government notification to address conflicting rulings. Place of supply rule for intermediary services is aligned with general supply rules, easing export taxation. Customs reforms extend jurisdiction for fishing, clarify Indianflagged vessel definition, streamline warehousing transfers, expand advance ruling validity, and introduce duty deferment and baggage modernization measures, plus tariff and exemption restructurings affecting trade costs. (AI Summary)

GST AMENDMENTS – FINANCE BILL, 2026 (CHAPTER V)

Provision

Amendment

Earlier Position

Impact

CGST ActSection 15 (Valuation: Post-supply discounts)

Requirement of linking post-supply discounts to a pre-agreed contract and specific invoices is removed, subject to reversal of ITC by the recipient through credit note under Section 34.

Post-supply discounts were deductible only if agreed prior to supply and specifically linked to relevant invoices, along with proportionate ITC reversal.

Brings significant relief for commercial discounts (volume/year-end discounts); reduces valuation disputes and litigation

CGST ActSection 34 (Credit Notes)

Section 34 amended to explicitly cover post-supply discounts referred to in Section 15(3)(b)

No explicit statutory linkage between Section 15 discounts and issuance of credit notes under Section 34.

Provides clarity and statutory alignment; strengthens legality of credit notes issued for post-supply discounts.

CGST ActSection 54 (Refunds)

(i) Provisional refund extended to inverted duty structure cases; (ii) Threshold limit for refund claims on exports with payment of tax removed.

Provisional refunds were largely restricted to zero-rated supplies; refund claims were subject to a minimum threshold.

Improves cash flow for manufacturers and exporters; reduces working capital blockage.

CGST ActSection 101A (Advance Ruling Appeals)

New sub-section (1A) empowers Government to notify an existing authority (including a Tribunal) to hear appeals until National Appellate Authority is constituted.

No functional appellate forum for conflicting Advance Rulings due to non-constitution of National Appellate Authority.

Provides interim appellate remedy; reduces uncertainty arising from conflicting Advance Rulings.

IGST ActSection 13 (Place of Supply: Intermediary Services)

Clause (b) of Section 13(8) omitted; intermediary services to follow general place of supply rule under Section 13(2).

Place of supply deemed to be location of supplier, resulting in GST on many cross-border intermediary services.

Major relief for service exporters; aligns GST with international VAT principles and reduces export taxation.

 

CUSTOMS AMENDMENTS – FINANCE BILL, 2026 (CHAPTER V)

Provision

Amendment

Impact

Customs ActSection 1

Customs jurisdiction extended beyond territorial waters of India for fishing and fishing-related activities.

Enables effective regulation and enforcement over fishing activities in extra-territorial waters

Customs ActSection 2

New definition of “Indian-flagged fishing vessel” inserted:

“Indian-flagged fishing vessel” means a vessel which is used or intended to be used for the purpose of fishing in the seas and entitled to fly the flag of India;”.

Provides legal certainty and supports enforcement of new fishing-related customs provisions.

Customs ActSection 28(6)

Penalty paid under Section 28(5) deemed to be a charge for non-payment of duty.

Strengthens recovery mechanism and priority of government dues.

Customs ActSection 28J

(i) Advance rulings valid for five years or till change in law/facts;

(ii) existing rulings can be extended for five years on request.

Enhances certainty and predictability for importers/exporters relying on advance rulings.

Customs Act – Section 56A (New)

Special provisions introduced for fishing by Indian-flagged vessels beyond territorial waters;

(i) fish brought to India exempt from duty;

(ii) fish landed at foreign ports treated as exports.

Boosts Indian fishing industry; provides duty exemption and export benefits.

Customs ActSection 67 (Substituted)

Prior permission of proper officer no longer required for transfer of goods between warehouses.

Simplifies warehousing procedures; reduces compliance burden and operational delays

Customs ActSection 84(b)

Board empowered to frame regulations for custody of goods imported/exported by post or courier.

Enables better regulation of courier and postal imports/exports.

Customs Tariff ActFirst Schedule

Tariff rate revisions, new tariff entries, and composite duties introduced with effect from 1 April / 1 May 2026, as applicable.

May impact import costs, pricing, and supply chain decisions; requires re-evaluation of landed cost

 

CONSEQUENTIAL NOTIFICATIONS (INDIRECT TAXES)

A. CENTRAL EXCISE NOTIFICATIONS

Notification

Amendment

Impact

Notification No. 01/2026–Central Excise

National Calamity Contingent Duty (NCCD) on chewing tobacco, jarda scented tobacco and other tobacco products capped at 25% with effect from 1 May 2026.

Increases duty incidence on specified tobacco products; manufacturers need to realign pricing and duty computation

Notification No. 02/2026–Central Excise

(i) Extension of concessional excise regime timelines from 2026 to 2028; (ii) New entry inserted for blended CNG with Biogas/CBG, prescribing 14% excise duty with valuation exclusions.

Promotes use of cleaner fuels; provides valuation clarity and concessional framework till 2028.

Notification No. 03/2026–Central Excise

Rescission of Notification No. 05/2023–Central Excise with effect from 2 February 2026.

Withdraws earlier excise concessions; taxpayers must reassess eligibility and duty exposure

B. CUSTOMS NOTIFICATIONS

Notification

Amendment

Impact

Notification No. 01/2026–Customs

Validity of multiple exemption notifications extended from 31 March 2026 to 31 March 2028; inclusion of Battery Energy Storage Systems (BESS); rationalisation and sunset clauses introduced.

Provides long-term certainty to exporters and green-energy sector; enables continued duty benefits till 2028.

Notification No. 02/2026–Customs

Extensive rationalisation of exemption entries under Notification 45/2025–Customs: multiple entries omitted, sunset dates extended to 31 March 2028, and new concessional entries added for solar, wind, nuclear, defence and electronics sectors.

Major restructuring of customs exemption landscape; businesses must reassess classification, eligibility and cost structures.

Notification No. 03/2026–Customs

Amendments to Notifications 11/2018-Customs and 11/2021-Customs including tariff inclusions, omissions, and revised concessional rates.

Impacts imports of toys, spent catalysts, tyres and other specified goods; requires updated customs planning.

Notification No. 04/2026–Customs

Substitution of Baggage Rules, 2016 with Baggage Rules, 2026.

Aligns baggage exemptions with updated policy framework; impacts passenger imports.

Notification No. 05/2026–Customs

Rescission of Notification Nos. 11/2004-Customs and 27/2016-Customs.

Withdrawal of legacy exemptions; increases duty exposure unless covered elsewhere

Notification No. 12/2026–Customs (N.T.)

Deferred payment of import duty facility extended to Eligible Manufacturer Importers up to 31 March 2028.

Enhances liquidity for manufacturers by deferring duty outflow.

Notification No. 13/2026–Customs (N.T.)

Amendment to Deferred Payment of Import Duty Rules, prescribing revised monthly payment timelines.

Provides procedural clarity and certainty in duty payment scheduling.

Notification No. 14/2026–Customs (N.T.)

Baggage Rules, 2016 are superseded and replaced with Baggage Rules, 2026, prescribing revised duty-free allowances, detailed eligibility conditions, new annexures, appendices, and expanded list of household articles under Transfer of Residence.

Comprehensive overhaul of baggage regime; provides clarity on allowances, strengthens compliance, and modernises passenger facilitation while tightening misuse risks

Notification No. 15/2026–Customs (N.T.)

Introduction of Customs Baggage (Declaration and Processing) Regulations, 2026, replacing multiple legacy regulations; mandates electronic baggage declaration via ICEGATE / ATITHI platform with risk-based verification

Digitises baggage processing end-to-end; reduces manual interface, enhances risk management, and improves passenger experience while increasing compliance discipline.

 

 

CBIC Circulars issued on 1 February 2026 (Customs)

Circular No. & Date

Subject / Key Clarification

What the Circular Provides

Practical Impact for Trade & Professionals

Circular No. 02/2026-Customs (01.02.2026)

Clarification on “RPA (Remote Pilot Aircraft) for military use”

Clarifies that the term RPA in Notification No. 45/2025-Customs includes drones, UAVs and UAS, irrespective of nomenclature, provided imports are for defence purposes and supported by MoD certification.

Removes ambiguity on scope of exemption; prevents denial of BCD/IGST exemption merely due to differing terminology. Helpful for defence PSUs, OEMs and importers of unmanned aerial systems.

Circular No. 03/2026-Customs (01.02.2026)

Deferred Payment of Import Duty – extension and expansion

(i) Extends deferred payment period from 15 days to 30 days; (ii) Introduces a new class of “Eligible Manufacturer Importers”; (iii) Facility available up to 31 March 2028.

Improves cash-flow efficiency for importers; manufacturers get structured access to deferred duty regime. Compliance teams must track revised timelines to avoid interest exposure

Circular No. 04/2026-Customs (01.02.2026)

Master Circular – Baggage Rules, 2026

Consolidates statutory provisions and operational instructions for implementation of Baggage Rules, 2026 and Customs Baggage (Declaration & Processing) Regulations, 2026; supersedes 35+ legacy circulars/instructions (Annexure-A).

Single authoritative reference on passenger baggage; ensures uniform application across ports; reduces interpretational disputes and outdated practices. Critical for airlines, airports and frequent travellers.

Circular No. 05/2026-Customs (01.02.2026)

Expansion of SWIFT 2.0 – onboarding of PGAs

Onboards COSCO, WCCB, Textile Committee and MeitY on SWIFT 2.0; introduces unified data fields, standardised document codes and digital integration of licences/NOCs with Bills of Entry.

Major procedural reform: reduces physical interface, enables single-touch-point clearance and increases data discipline. Importers must align internal documentation and filing processes with SWIFT 2.0 requirements.

Circular No. 06/2026-Customs (01.02.2026).

Automation of import & export processes

Introduces auto goods registration, auto Out of Charge (OOC) for imports and auto Let Export Order (LEO) for exports; extends benefits to AEO T2/T3, Eligible Manufacturer Importers and DPD importers.

Significant trade facilitation measure: faster clearance, reduced dwell time and minimal officer interface. However, risk-based “HOLD” powers retained — compliance robustness remains critical.

Circular No. 07/2026-Customs (01.02.2026)

E-scheduling of examination & Body Worn Cameras

Mandates system-based scheduling of cargo examination on ICEGATE 2.0 and mandatory BWC video recording during physical examination from 01.04.2026.

Enhances transparency, audit trail and litigation defensibility; reduces subjective examination disputes.

 

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