The issue involves two core legal questions under the CGST Act, 2017:
(i) whether the FAA is empowered to impose penalty under Section 125 when such penalty was not part of the original order passed under Section 129, and
(ii) whether rectification under Section 161 is maintainable for deletion of such penalty.
The original proceedings were initiated under Section 129 of the CGST Act, which is a special and self-contained provision dealing with detention, seizure, and release of goods in transit. Section 129 itself prescribes a specific penal consequence, i.e., payment of tax and penalty equivalent to 200% of the tax payable. Being a special provision, it overrides general penalty provisions in case of overlap.
Section 125 of the Act is a residuary penalty provision, applicable only where no specific penalty is provided elsewhere in the statute. Since Section 129 already contains a specific penal mechanism, invocation of Section 125 in such cases is legally debatable and may be considered inapplicable due to the principle that general provisions cannot override special provisions (generalibus specialia derogant).
Further, under Section 107, the FAA has appellate powers to confirm, modify, or annul an appealed order. However, such powers must remain within the scope of the original adjudication and subject matter of dispute. Imposition of a new penalty under Section 125, which was neither part of the original Section 129 order nor subjected to specific adjudication, may be challenged as being beyond jurisdiction and contrary to principles of natural justice, particularly if no notice for enhancement was issued.
With respect to Section 161, it permits rectification of errors apparent on the face of record within six months. If the imposition of Section 125 penalty is demonstrably a clear legal error arising from application of an inapplicable provision in a Section 129 case, it may qualify for rectification.
If the issue requires interpretation of law or adjudication on the interplay between Section 125 and Section 129, it may fall outside the limited scope of Section 161 and be treated as a substantive legal issue requiring appellate remedy before the GSTAT.
In conclusion, the imposition of Section 125 penalty in a Section 129 proceeding is legally arguable and susceptible to challenge, and while rectification under Section 161 can be attempted, the more effective remedy, if rejected, would be a further appeal before the GSTAT.