Dear Sir,
Prima facie, Department can demand duty,levy interest and also impose penalty on you provided you prove your bonafide and show them that it is regardless the premises was not registered but you were paying appropriate duty while removing of goods from the unregistered premises.
Start collecting the following documentory evidenses,namely: -
1) Copies of the Balance Sheet for the material period.
2) Schedule of sale for both the units clearly showing the quantum of duties paid thereon along with the documetory evidenses.
3) Concrete reason for not getting the registration certificate.
4) Bifurcation of ER-1, ER-4, ER-6, and ER-7. returns.
5) It is settled legal position that if the goods are not available then no confiscation can be made.
6) No you have not require to pay the duty again if you had paid to the revenue department but it will depend on the facts of the matter.
7) Yes, without any further delay, you would have to submit an application for seeking the registration certificate under Central Excise Act.
Whether you have been issued a Show Cause Notice by the Department as yet? Please clarify.
Regards,
Pradeep Khatri