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Issue ID: 120816
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GST- Refund of pre deposit- rejection of refund on the ground that electronic liability register shows negative balance

Date 16 Mar 2026
Replies7 Replies
Views 576 Views
Asked by
Refund of pre-deposit: pre-deposit should be refunded with interest when appeal succeeds, despite negative ELR entries.
A taxpayer's pre-deposit paid to pursue an appeal created a negative balance in the Electronic Liability Register after the appeal succeeded; the department denied a refund claiming the negative ELR balance could be adjusted against future demands. Forum contributors assert that a pre-deposit is not a tax but a condition for appeal and must be refunded with interest when the appeal is allowed, and advised filing an appeal against the refund rejection. (AI Summary)

A GST demand of Rs 2 Crores was confirmed, and the same was reflected in the Electronic Liability Register (ELR). An appeal was filed against the said order by making a redeposit of Rs 20 lakh, resulting in a reduction of demand to 1.80 Crore in ELR. Subsequently, the appeal was allowed, and the entire demand was set aside, and APL 04 was issued. As the entire demand of 2 Crores was reduced in ELR, a negative balance of 20 lakhs was shown in ELR, thereby indicating that a refund of Rs 20 lakhs is due from the department. A refund claimed was filed. A notice was issued to reject the refund claim on the ground that, as a negative balance was indicated in ELR, the same can be adjusted against future demands, and hence, the refund of the pre-deposit cannot be sanctioned. The apprehension of the department, if a negative balance remains even after the sanction of a refund, the same might be utilised for future demands, resulting in excess payment.

As per FAQ (https://tutorial.gst.gov.in/userguide/ledgers/Tax_Liability_Ledger.htm)

It was intimated that on the sanction of the refund of the pre-deposit, ELR will get updated accordingly. Any information on the GST form through which ELR will get updated upon the sanction of the refund

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